1 new changeset in galaxy-central: http://bitbucket.org/galaxy/galaxy-central/changeset/4220f8a5c571/ changeset: 4220f8a5c571 user: dan date: 2011-07-07 18:13:49 summary: Update annotation profiler tool sample configuration file. affected #: 2 files (153 bytes) --- a/tool-data/annotation_profiler_options.xml.sample Thu Jul 07 11:55:14 2011 -0400 +++ b/tool-data/annotation_profiler_options.xml.sample Thu Jul 07 12:13:49 2011 -0400 @@ -1,4 +1,4 @@ -<filter type="meta_key" name="dbkey" value="hg18"> +<filter type="data_meta" data_ref="input1" meta_key="dbkey" value="hg18"><options><option name="Mapping and Sequencing Tracks" value="group-map"><option name="STS Markers" value="stsMap"/> --- a/tools/annotation_profiler/annotation_profiler_for_interval.py Thu Jul 07 11:55:14 2011 -0400 +++ b/tools/annotation_profiler/annotation_profiler_for_interval.py Thu Jul 07 12:13:49 2011 -0400 @@ -340,6 +340,8 @@ options, args = parser.parse_args() + assert os.path.isdir( options.path ), IOError( "Configuration error: Table directory is missing (%s)" % options.path ) + #get profiler_info profiler_info = parse_profiler_info( os.path.join( options.path, 'profiler_info.txt' ) ) Repository URL: https://bitbucket.org/galaxy/galaxy-central/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.