1 new commit in galaxy-central: https://bitbucket.org/galaxy/galaxy-central/commits/270931cae37f/ Changeset: 270931cae37f User: inithello Date: 2013-12-17 18:20:08 Summary: Add script to clean up or display the contents of a tool dependency path. Affected #: 1 file diff -r 786c58661b6429a7bcdb0978df1da74dddbd656d -r 270931cae37f2efaac24f6c22236e5fa0b87ce23 lib/tool_shed/scripts/clean_up_tool_dependency_directory.py --- /dev/null +++ b/lib/tool_shed/scripts/clean_up_tool_dependency_directory.py @@ -0,0 +1,58 @@ +import argparse +import os +import sys +import shutil + +def main( args ): + if not os.path.exists( args.basepath ): + print 'Tool dependency path %s does not exist.' % str( args.basepath ) + return 1 + if args.delete: + print 'Deleting contents of tool dependency path %s.' % args.basepath + for node in os.listdir( args.basepath ): + path = os.path.join( args.basepath, node ) + if os.path.isdir( path ): + try: + shutil.rmtree( path ) + print 'Deleted directory %s and all its contents.' % path + except Exception, e: + print 'Error deleting directory %s: %s' % ( path, str( e ) ) + pass + elif os.path.isfile( path ): + try: + os.remove( path ) + print 'Deleted file %s.' % path + except Exception, e: + print 'Error deleting file %s: %s' % ( path, str( e ) ) + pass + elif os.path.islink( path ): + print 'Deleting symlink %s with target %s.' % ( path, os.path.realpath( path ) ) + try: + os.remove( path ) + except Exception, e: + print 'Error deleting symlink %s: %s' % ( path, str( e ) ) + pass + else: + print 'Tool dependency path %s contains the following files and directories:' % args.basepath + for element in os.listdir( args.basepath ): + print element + return 0 + +if __name__ == '__main__': + description = 'Clean out or list the contents of the provided tool dependency path. Remove if ' + description += 'the --delete command line argument is provided.' + parser = argparse.ArgumentParser( description=description ) + parser.add_argument( '--delete', + dest='delete', + required=False, + action='store_true', + default=False, + help='Whether to delete all folders and files or list them on exit.' ) + parser.add_argument( '--basepath', + dest='basepath', + required=True, + action='store', + metavar='name', + help='The base path where tool dependencies are installed.' ) + args = parser.parse_args() + sys.exit( main( args ) ) Repository URL: https://bitbucket.org/galaxy/galaxy-central/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.