[galaxyproject/galaxy] 74ad0a: Remove repetition in Galaxy env setup in the job s...
Branch: refs/heads/release_17.09 Home: https://github.com/galaxyproject/galaxy Commit: 74ad0acb52031355c7efe28b00d1d9b0205174f2 https://github.com/galaxyproject/galaxy/commit/74ad0acb52031355c7efe28b00d1d... Author: Nate Coraor <nate@bx.psu.edu> Date: 2017-09-21 (Thu, 21 Sep 2017) Changed paths: M lib/galaxy/dependencies/pinned-requirements.txt M lib/galaxy/jobs/command_factory.py M lib/galaxy/jobs/runners/pulsar.py M lib/galaxy/jobs/runners/util/job_script/DEFAULT_JOB_FILE_TEMPLATE.sh Log Message: ----------- Remove repetition in Galaxy env setup in the job script and fix issues with remote metadata on Pulsar. Commit: 276af4db2ab5e81f4af8f35b7d09f48d9fed8dcd https://github.com/galaxyproject/galaxy/commit/276af4db2ab5e81f4af8f35b7d09f... Author: Nate Coraor <nate@bx.psu.edu> Date: 2017-09-21 (Thu, 21 Sep 2017) Changed paths: M lib/galaxy/jobs/command_factory.py M lib/galaxy/jobs/runners/util/job_script/DEFAULT_JOB_FILE_TEMPLATE.sh Log Message: ----------- Job script enhancements based on feedback. Commit: 53095d688be81a36c31b9721caebf58b383cfe72 https://github.com/galaxyproject/galaxy/commit/53095d688be81a36c31b9721caebf... Author: Nate Coraor <nate@bx.psu.edu> Date: 2017-09-21 (Thu, 21 Sep 2017) Changed paths: M lib/galaxy/jobs/__init__.py M lib/galaxy/jobs/command_factory.py M lib/galaxy/jobs/runners/pulsar.py M lib/galaxy/model/metadata.py Log Message: ----------- Fix remote datatypes_conf.xml and registry.xml param rewriting with Pulsar Commit: db5185cca0bb9b5f59d8fcf218eb4c5d81cb5911 https://github.com/galaxyproject/galaxy/commit/db5185cca0bb9b5f59d8fcf218eb4... Author: Nate Coraor <nate@bx.psu.edu> Date: 2017-09-21 (Thu, 21 Sep 2017) Changed paths: M lib/galaxy/dependencies/pinned-requirements.txt M lib/galaxy/jobs/runners/pulsar.py Log Message: ----------- Pulsar release was 0.8.0 not 0.7.5 Commit: c7699cd3a0e16b9522af334cf2ea1a107fbe5f57 https://github.com/galaxyproject/galaxy/commit/c7699cd3a0e16b9522af334cf2ea1... Author: Nate Coraor <nate@bx.psu.edu> Date: 2017-09-21 (Thu, 21 Sep 2017) Changed paths: M lib/galaxy/jobs/runners/pulsar.py Log Message: ----------- Fix lint error Commit: d1be9e6a8fa1a383b3f75d1ea5f1b0d486b69258 https://github.com/galaxyproject/galaxy/commit/d1be9e6a8fa1a383b3f75d1ea5f1b... Author: John Chilton <jmchilton@gmail.com> Date: 2017-09-22 (Fri, 22 Sep 2017) Changed paths: M lib/galaxy/jobs/__init__.py M lib/galaxy/jobs/command_factory.py M lib/galaxy/jobs/runners/pulsar.py M lib/galaxy/jobs/runners/util/job_script/DEFAULT_JOB_FILE_TEMPLATE.sh M lib/galaxy/model/metadata.py Log Message: ----------- Merge pull request #4622 from natefoo/pulsar-remote-metadata-fixes [17.09] Pulsar remote metadata fixes Compare: https://github.com/galaxyproject/galaxy/compare/27a28e2c406d...d1be9e6a8fa1
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