2 new commits in galaxy-central: https://bitbucket.org/galaxy/galaxy-central/commits/5a264a194528/ Changeset: 5a264a194528 User: Gian...@crs4.it Date: 2013-12-20 10:58:08 Summary: Add <version_command>. Affected #: 2 files diff -r 3e2b61de5a2322563c1ffa49e03c118144f5068c -r 5a264a194528efdffd6aec050b96a38701a7563e tools/sr_assembly/velvetg.xml --- a/tools/sr_assembly/velvetg.xml +++ b/tools/sr_assembly/velvetg.xml @@ -1,5 +1,6 @@ <tool id="velvetg" name="velvetg" version="1.0.0"><description>Velvet sequence assembler for very short reads</description> + <version_command>velvetg 2>&1 | grep "Version" | sed -e 's/Version //'</version_command><command interpreter="python"> velvetg_wrapper.py '$input.extra_files_path' diff -r 3e2b61de5a2322563c1ffa49e03c118144f5068c -r 5a264a194528efdffd6aec050b96a38701a7563e tools/sr_assembly/velveth.xml --- a/tools/sr_assembly/velveth.xml +++ b/tools/sr_assembly/velveth.xml @@ -1,5 +1,6 @@ <tool id="velveth" name="velveth" version="1.0.0"><description>Prepare a dataset for the Velvet velvetg Assembler</description> + <version_command>velveth 2>&1 | grep "Version" | sed -e 's/Version //'</version_command><command interpreter="python"> velveth_wrapper.py '$out_file1' '$out_file1.extra_files_path' https://bitbucket.org/galaxy/galaxy-central/commits/c304bf90e8cf/ Changeset: c304bf90e8cf User: jmchilton Date: 2013-12-26 15:41:39 Summary: Merged in gmauro/galaxy-central (pull request #283) Add <version_command>. Affected #: 2 files diff -r 2c64d7fe6a7827b8d2b870c557ffc4d7acc24eca -r c304bf90e8cffa8c39eba2d14d940ac24a67457a tools/sr_assembly/velvetg.xml --- a/tools/sr_assembly/velvetg.xml +++ b/tools/sr_assembly/velvetg.xml @@ -1,5 +1,6 @@ <tool id="velvetg" name="velvetg" version="1.0.0"><description>Velvet sequence assembler for very short reads</description> + <version_command>velvetg 2>&1 | grep "Version" | sed -e 's/Version //'</version_command><command interpreter="python"> velvetg_wrapper.py '$input.extra_files_path' diff -r 2c64d7fe6a7827b8d2b870c557ffc4d7acc24eca -r c304bf90e8cffa8c39eba2d14d940ac24a67457a tools/sr_assembly/velveth.xml --- a/tools/sr_assembly/velveth.xml +++ b/tools/sr_assembly/velveth.xml @@ -1,5 +1,6 @@ <tool id="velveth" name="velveth" version="1.0.0"><description>Prepare a dataset for the Velvet velvetg Assembler</description> + <version_command>velveth 2>&1 | grep "Version" | sed -e 's/Version //'</version_command><command interpreter="python"> velveth_wrapper.py '$out_file1' '$out_file1.extra_files_path' Repository URL: https://bitbucket.org/galaxy/galaxy-central/ -- This is a commit notification from bitbucket.org. You are receiving this because you have the service enabled, addressing the recipient of this email.