Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: 20f98df554f502bddff1f22879bf867f97ab7288 https://github.com/galaxyproject/galaxy/commit/20f98df554f502bddff1f22879bf8... Author: mvdbeek m.vandenbeek@gmail.com Date: 2016-10-24 (Mon, 24 Oct 2016)
Changed paths: M lib/galaxy/jobs/runners/cli.py
Log Message: ----------- Finish job for Torque SSH runner
Commit: 61d25720661cb120afc7b44c57f41a1b245e21e4 https://github.com/galaxyproject/galaxy/commit/61d25720661cb120afc7b44c57f41... Author: Marius van den Beek m.vandenbeek@gmail.com Date: 2016-10-24 (Mon, 24 Oct 2016)
Changed paths: M lib/galaxy/jobs/runners/cli.py
Log Message: ----------- More explcit logging of CLI runner state change (thx @nsoranzo)
Commit: a3ac57dbc532320c98e0b4a72772663293ab3b06 https://github.com/galaxyproject/galaxy/commit/a3ac57dbc532320c98e0b4a727726... Author: mvdbeek m.vandenbeek@gmail.com Date: 2016-11-04 (Fri, 04 Nov 2016)
Changed paths: M config/galaxy.ini.sample M lib/galaxy/tools/deps/conda_util.py M lib/galaxy/tools/deps/resolvers/conda.py
Log Message: ----------- Remove verbose_install_check option
This option was introduced with #2554 and #2538, in reponse to a false positive conda install. This would have been caught by simply checking the exit code, which we are doing by default now. The additional verification is too strigent and not in line with the conda resolver. Activating this option will report perfectly well installed conda environments as having failed and will cause them to be uninstalled.
Commit: d144f18e7a6eaa5276b2d63f51457eda1befd679 https://github.com/galaxyproject/galaxy/commit/d144f18e7a6eaa5276b2d63f51457... Author: Nate Coraor nate@bx.psu.edu Date: 2016-11-11 (Fri, 11 Nov 2016)
Changed paths: M doc/source/admin/interactive_environments.rst
Log Message: ----------- Fix typo in GIE nginx proxy docs
Commit: b748ad1565a1e5064f6e08640c19b09a41b4b2bc https://github.com/galaxyproject/galaxy/commit/b748ad1565a1e5064f6e08640c19b... Author: Eric Rasche rasche.eric@gmail.com Date: 2016-11-11 (Fri, 11 Nov 2016)
Changed paths: M doc/source/admin/interactive_environments.rst
Log Message: ----------- Merge pull request #3157 from galaxyproject/gie-doc-fix
[16.07] Fix typo in GIE nginx proxy docs
Commit: ae3bdf31dc815dfce305316fe67776bc6802ec1a https://github.com/galaxyproject/galaxy/commit/ae3bdf31dc815dfce305316fe6777... Author: John Chilton jmchilton@gmail.com Date: 2016-11-13 (Sun, 13 Nov 2016)
Changed paths: M config/galaxy.ini.sample M lib/galaxy/tools/deps/conda_util.py M lib/galaxy/tools/deps/resolvers/conda.py
Log Message: ----------- Merge pull request #3127 from mvdbeek/remove_verbose_install_check_16.07
[16.07] Remove verbose_install_check option
Commit: 727270261750fc71979e7ba9fec96b10091ff104 https://github.com/galaxyproject/galaxy/commit/727270261750fc71979e7ba9fec96... Author: Nicola Soranzo nsoranzo@tiscali.it Date: 2016-11-14 (Mon, 14 Nov 2016)
Changed paths: M lib/galaxy/jobs/runners/cli.py
Log Message: ----------- Merge pull request #3085 from mvdbeek/fix_torque_ssh
[16.07] Finish job for Torque SSH/CLI runner
Commit: ca4e8914ecddbba007c1f65ff17f51e719c0c149 https://github.com/galaxyproject/galaxy/commit/ca4e8914ecddbba007c1f65ff17f5... Author: Nicola Soranzo nicola.soranzo@tgac.ac.uk Date: 2016-11-14 (Mon, 14 Nov 2016)
Changed paths: M config/galaxy.ini.sample M doc/source/admin/interactive_environments.rst M lib/galaxy/jobs/runners/cli.py M lib/galaxy/tools/deps/conda_util.py M lib/galaxy/tools/deps/resolvers/conda.py
Log Message: ----------- Merge branch 'release_16.07' into dev
Conflicts: lib/galaxy/tools/deps/conda_util.py
Compare: https://github.com/galaxyproject/galaxy/compare/bfabe00ea8f0...ca4e8914ecdd
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