1 new changeset in galaxy-central:

http://bitbucket.org/galaxy/galaxy-central/changeset/896846341a36/ changeset: 896846341a36 user: peterjc date: 2011-08-12 11:33:26 summary: Add missing requirement and fix incorrect help text in extract sequence tool affected #: 1 file (125 bytes)

--- a/tools/extract/extract_genomic_dna.xml Thu Aug 11 18:37:14 2011 -0400 +++ b/tools/extract/extract_genomic_dna.xml Fri Aug 12 10:33:26 2011 +0100 @@ -1,4 +1,4 @@ -<tool id="Extract genomic DNA 1" name="Extract Genomic DNA" version="2.2.1"> +<tool id="Extract genomic DNA 1" name="Extract Genomic DNA" version="2.2.2"><description>using coordinates from assembled/unassembled genomes</description><command interpreter="python"> extract_genomic_dna.py $input $out_file1 -o $out_format -d $dbkey @@ -51,6 +51,9 @@ </change_format></data></outputs> + <requirements> + <requirement type="binary">faToTwoBit</requirement> + </requirements><tests><test><param name="input" value="1.bed" dbkey="hg17" ftype="bed" /> @@ -110,7 +113,7 @@

.. class:: warningmark

-This tool requires tabular formatted data. If your data is not TAB delimited, use *Text Manipulation-&gt;Convert*. +This tool requires interval or gff (special tabular formatted data). If your data is not TAB delimited, first use *Text Manipulation-&gt;Convert*.

.. class:: warningmark

Repository URL: https://bitbucket.org/galaxy/galaxy-central/

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