Branch: refs/heads/release_18.09 Home: https://github.com/galaxyproject/galaxy Commit: 54d137edab3fb33beac87c23cd35fb19dd7f44fa https://github.com/galaxyproject/galaxy/commit/54d137edab3fb33beac87c23cd35f... Author: Nicola Soranzo <nicola.soranzo@earlham.ac.uk> Date: 2018-09-18 (Tue, 18 Sep 2018) Changed paths: M lib/galaxy/web/framework/base.py Log Message: ----------- Remove deprecated `decode_param_names` parameter It has been deprecated since WebOb 1.1 and ignored since WebOb 1.2 . Commit: 8ed19a3a09df9b66266f66bc53e504c781ae524d https://github.com/galaxyproject/galaxy/commit/8ed19a3a09df9b66266f66bc53e50... Author: Nicola Soranzo <nicola.soranzo@earlham.ac.uk> Date: 2018-09-18 (Tue, 18 Sep 2018) Changed paths: M lib/galaxy/tools/toolbox/base.py M lib/galaxy/tools/verify/interactor.py Log Message: ----------- `async` is a reserved keyword in Python 3.7 - Remove unused `async` parameter of `stage_data_async()` method. - Rename `async` parameter of `quick_load()` method. Fix https://github.com/galaxyproject/galaxy/issues/6717 . xref. https://github.com/galaxyproject/galaxy/issues/1715 Commit: 8982212d396c1ab216c5c9ea0656e5231e05d745 https://github.com/galaxyproject/galaxy/commit/8982212d396c1ab216c5c9ea0656e... Author: Nicola Soranzo <nicola.soranzo@earlham.ac.uk> Date: 2018-09-18 (Tue, 18 Sep 2018) Changed paths: M lib/galaxy/util/xml_macros.py M scripts/loc_files/create_all_fasta_loc.py Log Message: ----------- Replace deprecated `xml.etree.ElementTree.Element.getiterator()` with `iter()` Commit: f0708488aa08393cfdf3ab3e0e45e37982d050d0 https://github.com/galaxyproject/galaxy/commit/f0708488aa08393cfdf3ab3e0e45e... Author: Nicola Soranzo <nicola.soranzo@earlham.ac.uk> Date: 2018-09-18 (Tue, 18 Sep 2018) Changed paths: M pytest.ini Log Message: ----------- pytest: disable test collection of classes starting with `Test` Fix warnings like: ``` /home/travis/build/galaxyproject/galaxy/lib/galaxy/tools/verify/test_data.py:29: PytestWarning: cannot collect test class 'TestDataResolver' because it has a __init__ constructor class TestDataResolver(object): ``` appearing e.g. in https://travis-ci.org/galaxyproject/galaxy/jobs/428114139 . See pytest documentation: https://docs.pytest.org/en/latest/reference.html#confval-python_classes Commit: 0974b130ef922e3177de27f6365ccd624bf194a7 https://github.com/galaxyproject/galaxy/commit/0974b130ef922e3177de27f6365cc... Author: Dannon <dannon.baker@gmail.com> Date: 2018-09-18 (Tue, 18 Sep 2018) Changed paths: M lib/galaxy/tools/toolbox/base.py M lib/galaxy/tools/verify/interactor.py M lib/galaxy/util/xml_macros.py M lib/galaxy/web/framework/base.py M pytest.ini M scripts/loc_files/create_all_fasta_loc.py Log Message: ----------- Merge pull request #6730 from nsoranzo/release_18.09_backport_6722 [18.09] Partial backport of #6722 Compare: https://github.com/galaxyproject/galaxy/compare/2874e87debcc...0974b130ef92 **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.