1 new changeset in galaxy-central:
http://bitbucket.org/galaxy/galaxy-central/changeset/69338ee03d1d/
changeset: r5130:69338ee03d1d
user: rc
date: 2011-02-25 21:58:13
summary: First pass of extract & filter VCF tools.
affected #: 6 files (22 bytes)
--- a/tools/vcf_tools/annotate.xml Fri Feb 25 14:58:35 2011 -0500
+++ b/tools/vcf_tools/annotate.xml Fri Feb 25 15:58:13 2011 -0500
@@ -1,5 +1,5 @@
-<tool id="vcf_annotate" name="Annotate a VCF file"
version="1.0.0">
- <description></description>
+<tool id="vcf_annotate" name="Annotate"
version="1.0.0">
+ <description>a VCF file (dbSNP, hapmap)</description><command
interpreter="python">
vcfPytools.py
annotate
@@ -27,7 +27,7 @@
</conditional></inputs><outputs>
- <data format="vcf" name="output1" label="${tool.name} on
${on_string}" />
+ <data format="vcf" name="output1" label="${tool.name}
${on_string}" /></outputs><tests><test>
--- a/tools/vcf_tools/intersect.xml Fri Feb 25 14:58:35 2011 -0500
+++ b/tools/vcf_tools/intersect.xml Fri Feb 25 15:58:13 2011 -0500
@@ -1,4 +1,4 @@
-<tool id="vcf_intersect" name="Intersect VCF Files"
version="1.0.0">
+<tool id="vcf_intersect" name="Intersect"
version="1.0.0"><description>Generate the intersection of two VCF
files</description><command interpreter="python">
vcfPytools.py
Repository URL:
https://bitbucket.org/galaxy/galaxy-central/
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