Branch: refs/heads/dev Home: https://github.com/galaxyproject/galaxy Commit: ca82e6d746a685209b9585b3f69128a55198f801 https://github.com/galaxyproject/galaxy/commit/ca82e6d746a685209b9585b3f6912... Author: Pablo Moreno <pablo.a.moreno@gmail.com> Date: 2016-06-25 (Sat, 25 Jun 2016) Changed paths: M lib/galaxy/jobs/runners/kubernetes.py Log Message: ----------- Deletes existing jobs with same ID when re-submitting. Commit: 01fd25b9f4b79b4f2868efc51ad76e19fc132b5d https://github.com/galaxyproject/galaxy/commit/01fd25b9f4b79b4f2868efc51ad76... Author: Pablo Moreno <pablo.a.moreno@gmail.com> Date: 2016-06-25 (Sat, 25 Jun 2016) Changed paths: M lib/galaxy/jobs/runners/kubernetes.py Log Message: ----------- Changes use of produce_unique_k8s_job_name to be able to use both job and job_wrappers. Commit: 409eb373cd9233f7925c64e9c5716859a2363ba1 https://github.com/galaxyproject/galaxy/commit/409eb373cd9233f7925c64e9c5716... Author: Pablo Moreno <pablo.a.moreno@gmail.com> Date: 2016-06-25 (Sat, 25 Jun 2016) Changed paths: M lib/galaxy/jobs/runners/kubernetes.py Log Message: ----------- Fixes stop job method so that it correctly scales down the Kubernetes job. Commit: 65a937965a22c46922f9b731475561e38809e588 https://github.com/galaxyproject/galaxy/commit/65a937965a22c46922f9b73147556... Author: Pablo Moreno <pablo.a.moreno@gmail.com> Date: 2016-06-26 (Sun, 26 Jun 2016) Changed paths: M lib/galaxy/jobs/runners/kubernetes.py Log Message: ----------- Improves handling of Kubernetes logs Commit: e8bf2df21fe7fb7405ea283a41eae22e6d58509f https://github.com/galaxyproject/galaxy/commit/e8bf2df21fe7fb7405ea283a41eae... Author: Pablo Moreno <pablo.a.moreno@gmail.com> Date: 2016-06-26 (Sun, 26 Jun 2016) Changed paths: M lib/galaxy/jobs/runners/kubernetes.py Log Message: ----------- Corrects usage of pods retrials parameters set in runner and container destinations. Commit: 89b5f3f47f14fa82065b83326332313ec8cca629 https://github.com/galaxyproject/galaxy/commit/89b5f3f47f14fa82065b833263323... Author: Pablo Moreno <pablo.a.moreno@gmail.com> Date: 2016-06-26 (Sun, 26 Jun 2016) Changed paths: M lib/galaxy/jobs/runners/kubernetes.py Log Message: ----------- Uses exception instead of pykube.exceptions.HTTPError to manage missing pod's log exception. Commit: 9db3453e6559cb883af22793b741a84f3abd071c https://github.com/galaxyproject/galaxy/commit/9db3453e6559cb883af22793b741a... Author: Pablo Moreno <pablo.a.moreno@gmail.com> Date: 2016-06-26 (Sun, 26 Jun 2016) Changed paths: M lib/galaxy/jobs/runners/kubernetes.py Log Message: ----------- Overrides parent fail_job to save stdout/stderr of pods when Kubernetes job fails (otherwise lost). Commit: 5eb60b3448f2cdf8706aa2ab43e4d51dcfc0a0cb https://github.com/galaxyproject/galaxy/commit/5eb60b3448f2cdf8706aa2ab43e4d... Author: Pablo Moreno <pablo.a.moreno@gmail.com> Date: 2016-06-28 (Tue, 28 Jun 2016) Changed paths: M lib/galaxy/jobs/runners/kubernetes.py Log Message: ----------- Adds missing whitespace to line in Kubernetes runner. Commit: f3e9736ca3a592d9aed006ecfd072f67cebfa006 https://github.com/galaxyproject/galaxy/commit/f3e9736ca3a592d9aed006ecfd072... Author: John Chilton <jmchilton@gmail.com> Date: 2016-07-11 (Mon, 11 Jul 2016) Changed paths: M lib/galaxy/jobs/runners/kubernetes.py Log Message: ----------- Merge pull request #2559 from phnmnl/feature/failingPodsNotDetected Kubernetes runner: improves handling of failed jobs Compare: https://github.com/galaxyproject/galaxy/compare/a74a23764cc1...f3e9736ca3a5