Branch: refs/heads/release_19.01 Home: https://github.com/galaxyproject/galaxy Commit: 88fd52a4bb55641fe44a630ae5702adcc630f3a5 https://github.com/galaxyproject/galaxy/commit/88fd52a4bb55641fe44a630ae5702... Author: mvdbeek m.vandenbeek@gmail.com Date: 2019-03-11 (Mon, 11 Mar 2019)

Changed paths: M test/api/test_workflows.py

Log Message: ----------- Test PJA actions

The rename action works, the hide action fails. Building this to fix https://github.com/galaxyproject/galaxy/issues/7473.

Commit: f26a1177b871c65dd14258024cc1ef65d4e7a8c9 https://github.com/galaxyproject/galaxy/commit/f26a1177b871c65dd14258024cc1e... Author: mvdbeek m.vandenbeek@gmail.com Date: 2019-03-11 (Mon, 11 Mar 2019)

Changed paths: M lib/galaxy/workflow/modules.py

Log Message: ----------- Fix delayed post jobs actions for DatabaseOperationTools

Commit: dc232273781bc96a3cda8b4f83245ae7e603fa01 https://github.com/galaxyproject/galaxy/commit/dc232273781bc96a3cda8b4f83245... Author: mvdbeek m.vandenbeek@gmail.com Date: 2019-03-11 (Mon, 11 Mar 2019)

Changed paths: M test/api/test_workflows.py M test/base/populators.py

Log Message: ----------- Add tests for delete_intermediate and change_datatype PJAs

`change_datatype` wasn't part of gxformat2, so this also requires a new release of gxformat2 with https://github.com/jmchilton/gxformat2/pull/7

Commit: 4cceb67d62dbae06dd6726b0db32e1d757505c3c https://github.com/galaxyproject/galaxy/commit/4cceb67d62dbae06dd6726b0db32e... Author: mvdbeek m.vandenbeek@gmail.com Date: 2019-03-11 (Mon, 11 Mar 2019)

Changed paths: M lib/galaxy/jobs/actions/post.py

Log Message: ----------- Fix ChangeDatatype action for collection output

Commit: 34725f61ac61dcf1366ec20de857fe7d67e9f0b3 https://github.com/galaxyproject/galaxy/commit/34725f61ac61dcf1366ec20de857f... Author: mvdbeek m.vandenbeek@gmail.com Date: 2019-03-11 (Mon, 11 Mar 2019)

Changed paths: M lib/galaxy/tools/__init__.py

Log Message: ----------- Consolidate hiding HDAs in DatabaseOperation tools

This fixes dataset being added to histories when the source HDA is visible.

Commit: df8a4dcf16c60f323aa11001a31079345c4803f5 https://github.com/galaxyproject/galaxy/commit/df8a4dcf16c60f323aa11001a3107... Author: mvdbeek m.vandenbeek@gmail.com Date: 2019-03-11 (Mon, 11 Mar 2019)

Changed paths: M lib/galaxy/jobs/actions/post.py M test/api/test_workflows.py

Log Message: ----------- Fix ChangeDatatypeAction for collections

Commit: 5522360953f8d578792cf2fd681db007a97a8de5 https://github.com/galaxyproject/galaxy/commit/5522360953f8d578792cf2fd681db... Author: mvdbeek m.vandenbeek@gmail.com Date: 2019-03-11 (Mon, 11 Mar 2019)

Changed paths: M lib/galaxy/dependencies/pipfiles/default/pinned-requirements.txt

Log Message: ----------- Update to gxformat2 with change_datatype action

Commit: de7732f2777b63f02ac4cc31213831813421cc8b https://github.com/galaxyproject/galaxy/commit/de7732f2777b63f02ac4cc3121383... Author: Dannon dannon.baker@gmail.com Date: 2019-03-11 (Mon, 11 Mar 2019)

Changed paths: M lib/galaxy/dependencies/pipfiles/default/pinned-requirements.txt M lib/galaxy/jobs/actions/post.py M lib/galaxy/tools/__init__.py M lib/galaxy/workflow/modules.py M test/api/test_workflows.py M test/base/populators.py

Log Message: ----------- Merge pull request #7511 from mvdbeek/backport_pja_fixes

[19.01] Backport Fix post job actions for Database Operation tools, implement change_datatype for collection output

Compare: https://github.com/galaxyproject/galaxy/compare/aef53f6cde6f...de7732f2777b