2 new commits in galaxy-central:

https://bitbucket.org/galaxy/galaxy-central/commits/835eb008fbab/ Changeset: 835eb008fbab Branch: next-stable User: jgoecks Date: 2013-05-30 23:38:57 Summary: During workflow export, update workflow modules before visiting inputs to avoid errors resulting from parameter changes. Affected #: 1 file

diff -r fa04c813f5c9ddfaae1ed3e9896591128a07780d -r 835eb008fbabed538d7b10081e05680757646edd lib/galaxy/webapps/galaxy/controllers/workflow.py --- a/lib/galaxy/webapps/galaxy/controllers/workflow.py +++ b/lib/galaxy/webapps/galaxy/controllers/workflow.py @@ -1756,6 +1756,9 @@ def callback( input, value, prefixed_name, prefixed_label ): if isinstance( input, DataToolParameter ): data_input_names[ prefixed_name ] = True + + # FIXME: this updates modules silently right now; messages from updates should be provided. + module.check_and_update_state() visit_input_values( module.tool.inputs, module.state.inputs, callback ) # Filter # FIXME: this removes connection without displaying a message currently!

https://bitbucket.org/galaxy/galaxy-central/commits/7b4ce21a008f/ Changeset: 7b4ce21a008f User: jgoecks Date: 2013-05-30 23:39:22 Summary: Automated merge with next-stable Affected #: 1 file

diff -r 460bdfc91d32cf6692ff3dc1837b2e3d981dd1a2 -r 7b4ce21a008f1140cdcd042ad4a286f362de0641 lib/galaxy/webapps/galaxy/controllers/workflow.py --- a/lib/galaxy/webapps/galaxy/controllers/workflow.py +++ b/lib/galaxy/webapps/galaxy/controllers/workflow.py @@ -1756,6 +1756,9 @@ def callback( input, value, prefixed_name, prefixed_label ): if isinstance( input, DataToolParameter ): data_input_names[ prefixed_name ] = True + + # FIXME: this updates modules silently right now; messages from updates should be provided. + module.check_and_update_state() visit_input_values( module.tool.inputs, module.state.inputs, callback ) # Filter # FIXME: this removes connection without displaying a message currently!

Repository URL: https://bitbucket.org/galaxy/galaxy-central/

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