From jeremy.goecks@emory.edu Tue Mar 30 17:05:14 2010
From: Jeremy Goecks <jeremy.goecks@emory.edu>
To: galaxy-dev@lists.galaxyproject.org
Subject: Re: [galaxy-dev] Patch: show User menu's history and dataset	options
 show independent of app.config.use_remote_user setting
Date: Tue, 30 Mar 2010 17:05:03 -0400
Message-ID: <4a886c491003301405s6b93a8f7g264bdf82ffe08dc7@mail.gmail.com>
In-Reply-To: <16F6B5C4-833C-4055-9EEA-50B2B5E93F47@emory.edu>
MIME-Version: 1.0
Content-Type: multipart/mixed; boundary="===============6741933354917410363=="

--===============6741933354917410363==
Content-Type: text/plain; charset="utf-8"
Content-Transfer-Encoding: quoted-printable

Patch is changeset 3582:feff604427ee in galaxy-central

Thanks,
J.

On Tue, Mar 30, 2010 at 3:33 PM, Jeremy Goecks <jeremy.goecks(a)emory.edu>wro=
te:

> Still looks good. We'll get it into galaxy-central in the next day or two.
>
> Thanks,
> J.
>
>
>
> On Mar 29, 2010, at 2:51 PM, Ry4an Brase wrote:
>
> > Just a quick re-ping on this one.  It still applies cleanly, but I'm
> > happy to rebase if desired.
> >
> > On Tue, Mar 23, 2010 at 04:08:15PM -0500, Ry4an Brase wrote:
> >> It's not much, but we're using a remote_user setup and the History and
> >> Datasets menu items were not showing up under the User menu, which
> >> didn't seem to be by design.  Attached is a micro patch to the template,
> >> which is also available here:
> >>
> >>
> http://bitbucket.org/Ry4an/galaxy-umn-msi-changes/src/tip/always-show-users=
-history-datasets
> >>
> >> Also, What's the preferred patch submission mechanism?  Patchbomb?
> >> Bitbucket pull-request?
> >>
> >> Thanks,
> >>
> >> --
> >> Ry4an Brase                                         612-626-6575
> >> University of Minnesota Supercomputing Institute
> >> for Advanced Computational Research
> http://www.msi.umn.edu
> >
> >> # HG changeset patch
> >> # User JJ <jj(a)msi.umn.edu>
> >> # Date 1269360929 18000
> >> # Node ID 3424869fd91cfe435e7d46ebca7f1ef94ccbee70
> >> # Parent  bc2e61c2dac16e6eb37d34f3d3d6dee013b14368
> >> Made User menu's history and dataset options show independent of
> >> app.config.use_remote_user setting.
> >>
> >> diff -r bc2e61c2dac1 -r 3424869fd91c templates/base_panels.mako
> >> --- a/templates/base_panels.mako     Tue Mar 23 15:43:58 2010 -0400
> >> +++ b/templates/base_panels.mako     Tue Mar 23 11:15:29 2010 -0500
> >> @@ -269,12 +269,12 @@
> >>                         logout_url =3D h.url_for( controller=3D'/user',
> action=3D'logout' )
> >>                 %>
> >>                 <li><a target=3D"${logout_target}"
> href=3D"${logout_url}">Logout</a></li>
> >> -                <li><hr style=3D"color: inherit; background-color:
> gray"/></li>
> >> -                <li><a target=3D"galaxy_main" href=3D"${h.url_for(
> controller=3D'/history', action=3D'list' )}">Histories</a></li>
> >> -                <li><a target=3D"galaxy_main" href=3D"${h.url_for(
> controller=3D'/dataset', action=3D'list' )}">Datasets</a></li>
> >> -                %if app.config.get_bool( 'enable_pages', False ):
> >> -                    <li><a href=3D"${h.url_for( controller=3D'/page',
> action=3D'list' )}">Pages</a></li>
> >> -                %endif
> >> +            %endif
> >> +            <li><hr style=3D"color: inherit; background-color:
> gray"/></li>
> >> +            <li><a target=3D"galaxy_main" href=3D"${h.url_for(
> controller=3D'/history', action=3D'list' )}">Histories</a></li>
> >> +            <li><a target=3D"galaxy_main" href=3D"${h.url_for(
> controller=3D'/dataset', action=3D'list' )}">Datasets</a></li>
> >> +            %if app.config.get_bool( 'enable_pages', False ):
> >> +                <li><a href=3D"${h.url_for( controller=3D'/page',
> action=3D'list' )}">Pages</a></li>
> >>             %endif
> >>         </ul>
> >>         </div>
> >
> >
> > --
> > Ry4an Brase                                         612-626-6575
> > University of Minnesota Supercomputing Institute
> > for Advanced Computational Research
> http://www.msi.umn.edu
> >
> <ry4an-umn-msi-always-show-users-history-datasets.patch>___________________=
____________________________
> > galaxy-dev mailing list
> > galaxy-dev(a)lists.bx.psu.edu
> > http://lists.bx.psu.edu/listinfo/galaxy-dev
>
>
> _______________________________________________
> galaxy-dev mailing list
> galaxy-dev(a)lists.bx.psu.edu
> http://lists.bx.psu.edu/listinfo/galaxy-dev
>



--===============6741933354917410363==
Content-Type: text/html
Content-Transfer-Encoding: base64
Content-Disposition: attachment; filename="attachment.htm"
MIME-Version: 1.0
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--===============6741933354917410363==--