Hi guys, sorry for this mail flooding, seriously...

On May 28, 2010, at 1:59 PM, Davide Cittaro wrote:
[cut]

Needless to say, it's pretty useless... the object is kept in memory until galaxy is alive....


use_printdebug = False

solves the memory issue (at least doesn't call paste.PrintDebugMiddleware which calls paste.intercept_output....)
BTW, still not able to see BAM files... well, actually I can see the reads at the beginning of chromosome 10, which are the reads at the beginning of my BAM file :-(

d

/*
Davide Cittaro

Cogentech - Consortium for Genomic Technologies
via adamello, 16
20139 Milano
Italy

tel.: +39(02)574303007
e-mail: davide.cittaro@ifom-ieo-campus.it
*/