Hi John, Worked on first try! Thanks!!!!! George Weingart PhD On Thu, Aug 21, 2014 at 12:43 PM, John Chilton <jmchilton@gmail.com> wrote:
Hmm... in that case I think you can just create a multiple input data parameter.
<input type="data" format="tabular" multiple="true" name="inputs" label="blah" />
You can iterate through the files in your <command> tag and pass them to your merge.py file:
<command interpreter="python">merge.py #for $input in $inputs# $input #end for# ... </command>
This works unless you literally need 9 files - this input type doesn't support min/max right now. (There is a Trello card that includes adding such functionality if you want to vote on it https://trello.com/c/lp5YmA1O).
I hope this helps - let me know if this is not quite right.
-John
They are totally dynamic. Say all the files of tabular type that the User has at the moment.
On Thu, Aug 21, 2014 at 12:28 PM, John Chilton <jmchilton@gmail.com> wrote:
Are these 17 files fairly dynamic - i.e. are they going to depend on previous steps in a history or user uploads - or are they literally just 17 more or less fixed files associated with that tool and every user should see roughly the same 17 options.
-John
On Thu, Aug 21, 2014 at 3:03 PM, George Weingart <george.weingart@gmail.com> wrote:
Hello,
I would like to get advice how to implement the following application into Galaxy:
We have a set of say, 17 tabular files, we would like to present
On Thu, Aug 21, 2014 at 3:30 PM, George Weingart <george.weingart@gmail.com> wrote: them
to the User and allow him to select a subset of them, say 9.
Once he selected these files we would like to invoke our program “merge.py” against the subset of 9 files the User selected whose result is an output of one file.
How would the xml look?
Thanks! George Weingart
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