Peter, As of this morning, all of the repositories you listed below seem to have the expected results, with the exception of samtools_idxstats on the main tool shed. That repository was not tested due to an unhandled unicode error in the testing framework, which has been corrected, and the main tool shed's test framework is now being re-run with the updated code. --Dave B. On 11/21/2013 05:18 AM, Peter Cock wrote:
On Thu, Nov 21, 2013 at 10:02 AM, Peter Cock <p.j.a.cock@googlemail.com> wrote:
Similarly over on the Main Tool Shed (where I have not yet updated these two tools).
I currently have three tool repositories on the Main Tool Shed listed under "Latest revision: failing tool tests" yet with no test results:
* http://toolshed.g2.bx.psu.edu/view/peterjc/get_orfs_or_cdss/5208c15805ec Known dependency mis-configuration, updated version on Test Tool Shed. I would expect this revision to fail (saying Biopython not installed).
* http://toolshed.g2.bx.psu.edu/view/peterjc/seq_primer_clip/ee5acea162a7 Known dependency mis-configuration, updated version on Test Tool Shed. I would expect this revision to fail (saying Biopython not installed).
* http://toolshed.g2.bx.psu.edu/view/peterjc/samtools_idxstats/d4412c04d7b1 Should be identical to the working version on the Test Tool Shed, i.e. http://toolshed.g2.bx.psu.edu/view/peterjc/samtools_idxstats/93b8db68dde4 I would expect this revision to pass.
Regards,
Peter