2011/8/15 Louise-Amélie Schmitt <louise-amelie.schmitt@embl.de>

Hello,

Sorry for being late, again, but please find the tool attached.

Here is my last pull: 5743:720455407d1c

Stuff changed in the file but in the end I had to make the same modification again (change true to false) since it didn't work anymore.

Best,
L-A

Le 15/06/2011 09:56, Louise-Amélie Schmitt a écrit :

Hi, and sorry for the late reply

Here is the last pull: 5355:50e249442c5a

I'll try to be as concise as I can but I can send you the whole file if you need it. It's not completely done yet though.

This is a tool that produces a HTML file containing the results of various quality assessment programs. To trigger or block the execution of a specific program, I use checkboxes in the form, like this:
<param name="SQA" type="boolean" label="Run SolexaQA" checked="true" />

Then, I use the <configfile name="script"> tags to define a shell script that will be modified with cheetah tests on the checkboxes.

Then the final script is sent to another shell script that will check its existence and launch it:
<command interpreter='sh'>all_QA.sh $script </command>

As you can see, the checkboxes are checked by default. But before the change I mentioned is my last email, un-checking them didn't have any effect whatsoever. The following test, for instance, was always true:
#if $SQA.value == True

Moreover, even if I un-checked the checkboxes and ran the tool, then clicked the re-run button in the result in my history, all of them were checked in the form that appears, as if I never un-checked them.

Now, the state of the checkboxes is respected and I can properly choose what to run in my tool.

Hope that helps.
L-A

Le 08/06/2011 20:54, Jennifer Jackson a écrit :

Hi L-A,

Could you describe a use case (which tool/from, what options/input)? If you know the last pull # for your local install, that would also be helpful for us to know.

Best,

Jen
Galaxy team

On 6/6/11 2:15 AM, Louise-Amélie Schmitt wrote:

Hi,

Since I haven't updated Galaxy for a while now I don't know if it was
actually fixed but I had issues with my default-selected checkboxes:

When I deselected them, the value sent in the query remained as if they
were still selected. Even when I re-ran the job, all the checkboxes were
selected as if I never deselected them.

Therefore, in lib/galaxy/web/form_builder.py

I changed:
105 return '<input type="checkbox" id="%s" name="%s"
value="true"%s%s><input type="hidden" name="%s%s" value="true"%s>' \

for:
105 return '<input type="checkbox" id="%s" name="%s"
value="true"%s%s><input type="hidden" name="%s%s" value="false"%s>' \

And it works fine now :)

Cheers,
L-A
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