Dear Sir or Madam,
I am having difficult loading files onto my local galaxy instance. I
have given myself admin status, but when I attempt to add files to a
new library, I get the following message:
Error attempting to display contents of library (New data library):
(OperationalError) no such column: True u'SELECT
dataset_permissions.id AS dataset_permissions_id,
dataset_permissions.create_time AS dataset_permissions_create_time,
dataset_permissions.update_time AS dataset_permissions_update_time,
dataset_permissions.action AS dataset_permissions_action,
dataset_permissions.dataset_id AS dataset_permissions_dataset_id,
dataset_permissions.role_id AS dataset_permissions_role_id XnFROM
dataset_permissions XnWHERE True AND dataset_permissions.action = ?'
['access'].
I have tried toggling some things in the
universe_wsgi.ini as well as changing the permissions
associated with the library. But I still get this message.
After looking around a bit on the help site, I cam across the
following exchange on one of your boards:
http://dev.list.galaxyproject.org/Error-while-uploading-data-from-local-directory-td4656821.html
This is a bug that is fixed in revision ecd131b. Sorry for the
inconvenience.
-- jt
However, I have updated to the most recent release using mercurial,
so I don't know if this applies to me or not. How can I determine if
I have revision ecd131b? I'm running Max Os 10.7 and using Safari to
interface with galaxy. Actually, I was using Firefox at first, but
it was hanging during file uploads and the problem disappeared when
I switched to Safari. I guess this is a separate issue, but has
anyone reported similar problems?
--
John R. Clayton, PhD
Université de Strasbourg
Anopheles Group, CNRS UPR-9022
"Réponse Immunitaire et Développement chez les Insectes"
Institut de Biologie Moléculaire et Cellulaire (IBMC)
15, rue René Descartes F-67084 CEDEX Strasbourg France
Tel: +33 3.88.41.70.96
Fax: +33 3.88.60.69.22
Email: j.clayton@ibmc-cnrs.unistra.fr
http://www-ibmc.u-strasbg.fr/ridi/index.php?cont_id=9&lang=en