7 Oct
2013
7 Oct
'13
9:44 a.m.
On Mon, Oct 7, 2013 at 3:37 PM, Dave Bouvier <dave@bx.psu.edu> wrote:
Peter,
I did some investigating, and it turns out that the if [[ condition ]] syntax used in the ncbi tool dependency is only compatible with bash, not sh.
Does that mean the test system has switched between sh and bash and back to sh again?
For sh, the corresponding syntax would look like:
if [ "$string" = "value" ] then echo "string is equal to value" fi
However, it strikes me that the platform detection and download url determination could also be done using the recently introduced <actions_group> feature, which would bypass shell-dependent conditional syntax entirely.
Yes, but is that in stable releases for galaxy-dist yet? Thanks, Peter