Jason, Thanks for pointing this error out - it's now fixed in galaxy-central and appears to be working on test. This fix will be on main after the next scheduled update. On Sun, May 15, 2011 at 8:43 PM, Ellul Jason <Jason.Ellul@petermac.org> wrote:
Hi All,
I am installing and testing galaxy-dist locally and I have installed all the rgenetics tools and have them working but there seems to be a one problem.
If I upload a lped file, then edit the attributes and convert it to a plink pbed file the tools such as QC reports and Case Control will work. If however I select "(as pbed) RgeneticsData" to run the tool directly I receive the following error:
input data 1 is in error state I don't think this error is strictly related to rgenetics but something goes wrong after tools/parameters/basic.py gets called.
Thanks for producing a fantastic resource and I would appreciate any help, --
Jason Ellul Bioinformatician Cancer Research Division
Peter MacCallum Cancer Centre TEL: +61 3 9656 1512 FAX: +61 3 9656 1411 EMAIL: jason.ellul@petermac.org
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