Just for my curiosity, are you running a python environment isolated for galaxy or just using a system wide python environment?

 

Regards,

 

Iyad Kandalaft

Microbial Biodiversity Bioinformatics

Agriculture and Agri-Food Canada | Agriculture et Agroalimentaire Canada
960 Carling Ave.| 960 Ave. Carling

Ottawa, ON| Ottawa (ON) K1A 0C6

E-mail Address / Adresse courriel  Iyad.Kandalaft@agr.gc.ca
Telephone | Téléphone 613-759-1228
Facsimile | Télécopieur 613-759-1701
Teletypewriter | Téléimprimeur 613-773-2600
Government of Canada | Gouvernement du Canada

 

 

 

From: galaxy-dev-bounces@lists.bx.psu.edu [mailto:galaxy-dev-bounces@lists.bx.psu.edu] On Behalf Of INKozin
Sent: Thursday, June 12, 2014 11:35 AM
To: galaxy-dev@lists.bx.psu.edu
Subject: Re: [galaxy-dev] troubleshooting Galaxy with LSF

 

 

The problem seems to be with DRMAA for Python. While it works fine on the OpenSuse
12.1 box, I'm getting a segfault on RH 6.4.
Surprisingly, the job however gets submitted and run successfully.