Hello Rudolf, Thanks for the reply.. I use the command you mentioned in reply.. and the error is "psql: FATAL: Ident authentication failed for user "galaxy" " Thanks Sridhar On Tue, May 21, 2013 at 4:53 PM, Hans-Rudolf Hotz <hrh@fmi.ch> wrote:
Hi Sridhar
Since we are using MySQL for our Galaxy server, I am kind of running out of ideas...and hope someone else on the list can spot the error in your universe.ini file.
Just one last remark to double check:
Can you log into the PostgreSQL database with the same credentials from the command line?
psql -d galaxy_prod -p 5432 -h localhost -U galaxy
and this should prompt for the password (again, I am not an PostgreSQL expert...)
Regards, Hans-Rudolf
On 05/21/2013 01:00 PM, sridhar srinivasan wrote:
Hello Rudolf, I tried with the IP address it gave the error as """ Is the server running on host "192.168.1.1" and accepting TCP/IP connections on port 5432? """ Then i try with 0.0.0.0 again i got same error
OperationalError: (OperationalError) FATAL: Ident authentication failed for user "galaxy" None None
Thanks Sridhar
On Tue, May 21, 2013 at 3:08 PM, Hans-Rudolf Hotz <hrh@fmi.ch <mailto:hrh@fmi.ch>> wrote:
On 05/21/2013 11:22 AM, sridhar srinivasan wrote:
Hi Rudolf, Thanks for the reply..
Could you please tell how to check and set the PostgreSQL .. I provide the correct username and password in universe.ini file..
when i give
#database_connection = postgres:///galaxy_prod ?user=galaxy&password=password it gave error in history page """ Content Encoding Error
The page you are trying to view cannot be shown because it uses an invalid or unsupported form of compression.
* Please contact the website owners to inform them of this problem.
"""
Now after changing it into
database_connection = postgres://galaxy:password@__**localhost:5432/galaxy_prod
it gives error which i mentioned in previous mail....
Please suggest on this
Assuming you replace 'password' with the actual password, the line looks correct to me. Try replacing 'localhost' with the IP address
Regards, Hans-Rudolf
Thanks Sridhar
On Wed, May 8, 2013 at 7:16 PM, Hans-Rudolf Hotz <hrh@fmi.ch <mailto:hrh@fmi.ch> <mailto:hrh@fmi.ch <mailto:hrh@fmi.ch>>> wrote:
Hi Sridhar
Have you set up your PostgreSQL database correctly? and provide the right username and password in the 'universe_wsgi.ini' file ?
See: http://wiki.galaxyproject.org/**____Admin/Config/Performance/_** ___ProductionServer?action=**show&____redirect=Admin%** 2FConfig%____2FPerformance#**Switching_to_a_____database_**server <http://wiki.galaxyproject.**org/__Admin/Config/**Performance/__* *ProductionServer?action=show&_**_redirect=Admin%2FConfig%__** 2FPerformance#Switching_to_a__**_database_server>
<http://wiki.galaxyproject.__**org/Admin/Config/Performance/_** _ProductionServer?action=show&**__redirect=Admin%2FConfig%__** 2FPerformance#Switching_to_a__**_database_server
<http://wiki.galaxyproject.**org/Admin/Config/Performance/** ProductionServer?action=show&**redirect=Admin%2FConfig%** 2FPerformance#Switching_to_a_**database_server<http://wiki.galaxyproject.org/Admin/Config/Performance/ProductionServer?action=show&redirect=Admin%2FConfig%2FPerformance#Switching_to_a_database_server>
Also, see this old thread, where the same error has been reported before: http://lists.bx.psu.edu/____**pipermail/galaxy-dev/2010-May/** ____002624.html<http://lists.bx.psu.edu/____pipermail/galaxy-dev/2010-May/____002624.html> <http://lists.bx.psu.edu/__**pipermail/galaxy-dev/2010-May/** __002624.html<http://lists.bx.psu.edu/__pipermail/galaxy-dev/2010-May/__002624.html>
<http://lists.bx.psu.edu/__**pipermail/galaxy-dev/2010-May/** __002624.html<http://lists.bx.psu.edu/__pipermail/galaxy-dev/2010-May/__002624.html> <http://lists.bx.psu.edu/**pipermail/galaxy-dev/2010-May/** 002624.html<http://lists.bx.psu.edu/pipermail/galaxy-dev/2010-May/002624.html>
Regards, Hans-Rudolf
On 05/08/2013 01:24 PM, sridhar srinivasan wrote:
Hi ,
I am getting error during Installing galaxy locally.
Traceback (most recent call last): File
"/illumina/apps/galaxy/galaxy-**____dist/lib/galaxy/webapps/__** __galaxy/buildapp.py",
line 35, in app_factory app = UniverseApplication( global_conf = global_conf, **kwargs ) File
"/illumina/apps/galaxy/galaxy-**____dist/lib/galaxy/app.py", line 51,
in __init__ create_or_verify_database( db_url, kwargs.get( 'global_conf', {} ).get( '__file__', None ), self.config.database_engine___**__options, app=self ) File
"/illumina/apps/galaxy/galaxy-**____dist/lib/galaxy/model/__** migrate/__check.py",
line 50, in create_or_verify_database dataset_table = Table( "dataset", meta, autoload=True ) File
"/illumina/apps/galaxy/galaxy-**____dist/eggs/SQLAlchemy-0.5.** 6_____dev_r6498-py2.6.egg/____**sqlalchemy/schema.py",
line 108, in __call__ return type.__call__(self, name, metadata, *args, **kwargs) File
"/illumina/apps/galaxy/galaxy-**____dist/eggs/SQLAlchemy-0.5.** 6_____dev_r6498-py2.6.egg/____**sqlalchemy/schema.py", line 236, in __init__ _bind_or_error(metadata).____**reflecttable(self, include_columns=include_____**columns) File
"/illumina/apps/galaxy/galaxy-**____dist/eggs/SQLAlchemy-0.5.** 6_____dev_r6498-py2.6.egg/____**sqlalchemy/engine/base.py",
line 1261, in reflecttable conn = self.contextual_connect() File
"/illumina/apps/galaxy/galaxy-**____dist/eggs/SQLAlchemy-0.5.** 6_____dev_r6498-py2.6.egg/____**sqlalchemy/engine/base.py",
line 1229, in contextual_connect return self.Connection(self, self.pool.connect(), close_with_result=close_with__**___result, **kwargs) File
"/illumina/apps/galaxy/galaxy-**____dist/eggs/SQLAlchemy-0.5.** 6_____dev_r6498-py2.6.egg/____**sqlalchemy/pool.py", line 142, in connect return _ConnectionFairy(self).____**checkout() File
"/illumina/apps/galaxy/galaxy-**____dist/eggs/SQLAlchemy-0.5.** 6_____dev_r6498-py2.6.egg/____**sqlalchemy/pool.py",
line 304, in __init__ rec = self._connection_record = pool.get() File
"/illumina/apps/galaxy/galaxy-**____dist/eggs/SQLAlchemy-0.5.** 6_____dev_r6498-py2.6.egg/____**sqlalchemy/pool.py",
line 161, in get return self.do_get() File
"/illumina/apps/galaxy/galaxy-**____dist/eggs/SQLAlchemy-0.5.** 6_____dev_r6498-py2.6.egg/____**sqlalchemy/pool.py",
line 639, in do_get con = self.create_connection() File
"/illumina/apps/galaxy/galaxy-**____dist/eggs/SQLAlchemy-0.5.** 6_____dev_r6498-py2.6.egg/____**sqlalchemy/pool.py",
line 122, in create_connection return _ConnectionRecord(self) File
"/illumina/apps/galaxy/galaxy-**____dist/eggs/SQLAlchemy-0.5.** 6_____dev_r6498-py2.6.egg/____**sqlalchemy/pool.py",
line 198, in __init__ self.connection = self.__connect() File
"/illumina/apps/galaxy/galaxy-**____dist/eggs/SQLAlchemy-0.5.** 6_____dev_r6498-py2.6.egg/____**sqlalchemy/pool.py",
line 261, in __connect connection = self.__pool._creator() File
"/illumina/apps/galaxy/galaxy-**____dist/eggs/SQLAlchemy-0.5.** 6_____dev_r6498-py2.6.egg/____**sqlalchemy/engine/strategies._**___py",
line 80, in connect raise exc.DBAPIError.instance(None, None, e) OperationalError: (OperationalError) FATAL: Ident authentication failed for user "galaxy" None None
I created a user galaxy to install galaxy locally.
Thanks in Advance.
Sridhar
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