Hi, Thank you for getting back to me. I am developer at Loraine Lab and I am working on IGB (i.e Integrated Genome Browser). We would like to integrate IGB with Galaxy. So as per instruction of James, I have cloned copy of galaxy-central to make changes. I will then commit those changes in. I require to change a file name datatypes_conf.xml but that file is not present there. So should I make my changes in datatypes_conf.xml.sample? I am attaching copy of James email for reference. -- Hiral
Hi Ann, we'd be happy to integrate support for IGB. The normal way we do this is through a pull request on bitbucket. You basically make a clone of our development repository (galaxy-central) commit all the necessary changes, and we can pull it in. This retains commit history (including attributing the author of the code correctly in the history).
I've copied Jeremy, who would probably be the person to handle the pull. Let us know if this all makes sense and seems like a way forward. Thanks!
-- jt
James Taylor, Assistant Professor, Biology / Computer Science, Emory University
On Thursday, April 19, 2012 at 3:28 PM, Jeremy Goecks wrote:
Hiral,
I've cc'd the Galaxy development mailing list, which includes folks with experience in all areas of Galaxy. Can you be clear about what you're trying to do and what approach you're taking? Once it's clear what the issue is, someone can chime in with suggestions.
Best, J.
On Apr 19, 2012, at 12:44 PM, Hiral Vora wrote:
Hi Jeremy,
I have a question regarding committing my changes. I need to make changes to datatypes_conf.xml. But I see that repository does not have that file. So should I commit my changes to datatypes_conf.xml.sample instead?
Thanks, Hiral