Hello Everyone,

Performed a data retrieval using the rsync method for mm10 and also downloaded the .loc files per the “Data Integration” page

to the tool-data directory.  The paths match in the .loc file for bowtie2 of the mm10 download directory.

My problem is that I’m not seeing mm10 in the “Select Reference Genome” from within Bowtie2.

Any tips would be appreciated

Dwayne