Re: [galaxy-dev] Update on Megablast?

On Fri, Mar 23, 2012 at 5:07 PM, Luobin Yang <yangluob@isu.edu> wrote:

Yeah, that's what I was wondering: to update megablast tool to use NCBI BLAST+ .

I revised megablast wrapper a bit to use the legacy_blast.pl from NCBI BLAST+, but it seems the output format is not compatible with the tool (Fetch taxonomic representation) in metagenomic analyses anymore.

So it looks like the only solution at the moment is to have both NCBI NCBI+ and an old version of BLAST.

Thanks, Luobin

I think that was what John Major was talking about earlier this month: http://lists.bx.psu.edu/pipermail/galaxy-dev/2012-March/008926.html Peter