On Fri, Aug 22, 2014 at 9:39 AM, Marija Atanaskovic <matan@unimelb.edu.au> wrote:
Mira doesn’t work on Galaxy. This is the log message I receive.
Tool: Assemble with MIRA v3.4 Name: MIRA log Created: Fri Aug 22 00:24:38 2014 (UTC) Filesize: 0 bytes Dbkey: ? Format: txt Galaxy Tool Version: 0.0.10 Tool Version: None Tool Standard Output: stdout Tool Standard Error: stderr Tool Exit Code: None API ID: d5f55b83db1f410a Full Path: /mnt/galaxy/files/000/dataset_326.dat ...
What was the stdout and stderr information? Did you install this from the main tool shed?: https://toolshed.g2.bx.psu.edu/view/peterjc/mira_assembler
Also I can’t install Mira 4. This is the message I receive. Any suggestions.
Getting "Internal Server Error" is unhelpful - I can't really guess what might be going wrong here :( I have had problems with the MIRA dependencies when Bastien has renamed folders on sourceforge... are you using the Test Tool Shed here (since I have not yet released the MIRA 4 wrapper on the main ToolShed)?: https://testtoolshed.g2.bx.psu.edu/view/peterjc/mira4_assembler Regards, Peter