Hi there all,
Has anyone had success setting up job_conf.xml for slurm based clusters? I am having trouble getting the GALAXY_SLOTS env var set for any jobs. I've tried looking at destinations in the job_conf.xml but can't get SLURM_NTASKS to be set correctly so the slurm run script can translate that into GALAXY_SLOTS..
Does anyone have a toy example of a job_conf.xml for slurm that they wouldn't mind sharing?
Cheers,
Simon.
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Simon Gladman | BioinformaticianVictorian Life Sciences Computation Initiative - LSCC
700 Swanston Street, The University of Melbourne | Victoria 3010 Australia
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