I recently had a problem with fastq interlacer lately, I had to patch it on my galaxy instance to make it work again. Here is the patch (from the developper).
Date: Tue, 11 Dec 2012 17:33:05 +0800
From: caizexi123@yahoo.com.cn
To: galaxy-dev@lists.bx.psu.edu
CC: galaxy-dev@lists.bx.psu.edu
Subject: [galaxy-dev] some problem with the fastq interlacer
Hi all,
I ran the fastq interlacer with a fastq encoding 1.8+ data, the interlacer seems do not reganize the name of the pair-end reads, and treat the pair-end reads as non-pair-edn reads.
Best regards
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