There are multiple fastq formats and some tools only accept a subset of it. Please have a look at the 'FASTQ Groomer' tool it should allow you to convert your datase to the fastq format you need.

Thank you for using Galaxy

Martin

On Wed, Sep 2, 2015 at 12:52 PM Dong Liu <dl1974@uga.edu> wrote:

Dear Galaxy

I am a new user on Galaxy online service. When I uploaded my data file in fastq form, the utility of Galaxy such as NGS:QC and manipulation, FastQC and Trim sequences can not be availabe. I dont why. can you tell me how to use Galaxy using my data?

 

Dong Liu

 

visiting scholar at the University of Georgia,GA, USA

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