On Oct 1, 2012, at 12:50 PM, Langhorst, Brad wrote:
On Oct 1, 2012, at 12:16 PM, Nate Coraor <nate@bx.psu.edu> wrote:
Hi Derrick,
If you're using Postgres, it's now possible to clean these up using galaxy-dist/scripts/cleanup_datasets/pgcleanup.py
I hope this is not considered hijacking… I just tried to run the pgcleanup.py script and got this error message.
scripts/cleanup_datasets/pgcleanup.py __load_config INFO 2012-10-01 12:47:18,628 Reading config from /mnt/ngswork/galaxy/galaxy-dist/universe_wsgi.ini __connect_db INFO 2012-10-01 12:47:18,637 Connecting to database with URL: postgres:///galaxy?host=/var/run/postgresql&user=galaxy _run ERROR 2012-10-01 12:47:18,722 Unknown action in sequence: _run CRITICAL 2012-10-01 12:47:18,723 Exiting due to previous error(s) <module> ERROR 2012-10-01 12:47:18,723 Caught exception in run sequence: Traceback (most recent call last): File "scripts/cleanup_datasets/pgcleanup.py", line 769, in <module> cleanup._run() File "scripts/cleanup_datasets/pgcleanup.py", line 158, in _run sys.exit(1) SystemExit: 1
I have not yet started digging into this yet… so maybe it only affects me - but I thought this information might be useful to you.
Whoops. Use --help to get the options list. I'll have it spit that out when you don't specify an action in a commit in just a minute.
brad
-- Brad Langhorst langhorst@neb.com 978-380-7564
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