Hi Philipp I have successfully used "Docker for Mac (beta)” on 10.11.5, but I have always used the traditional location for the image to fetch from: https://index.docker.io/u/bgruening/galaxy-stable/ <https://index.docker.io/u/bgruening/galaxy-stable/> (i.e just following the excellent recipes on https://github.com/bgruening/docker-galaxy-stable <https://github.com/bgruening/docker-galaxy-stable> ) and just by coincidence: last night I tried 'quay.io/bgruening/galaxy:16.04' <http://quay.io/bgruening/galaxy:16.04'> and it didn’t work, but I haven’t investigated why…. Hans-Rudolf
On 29 Jun 2016, at 10:23, Rathert, Philipp, Dr. <philipp.rathert@ibc.uni-stuttgart.de> wrote:
Dear all I was wondering if anybody has experience running a galaxy production server using docker for mac. I know it's beta testing at the moment but since the Virtual machine environment gave us such a hard time preserving and managing user data etc. I thought I try it anyway...
However, it seems to be not as easy as expected.
after installation of docker I pull the new docker galaxy image with docker pull quay.io/bgruening/galaxy:16.04 <galaxy:16.04> When I start a test container with net=host docker run -it --net=host quay.io/bgruening/galaxy:16.04 <galaxy:16.04>) I am not able to connect to the galaxy web app and get this error:
Starting ProFTP proftpd: ERROR (abnormal termination)
and
==> /home/galaxy/logs/slurmd.log <== [2016-06-29T08:13:41.440] error: Unable to resolve "moby": Unknown host [2016-06-29T08:13:41.440] error: Unable to establish control machine address
I then tried to use Kinematik and at least I get the web app running. However, I didn't find the option to change the network settings to net=host
And I have the additional problem that I have to assign ownership rights to the folders in /export and I get the following error:
chown -R postgres:postgres <postgres:postgres> /postgresql chown: postgres: illegal group name
I know these are many issues, but maybe one of you has experience with this and could provide some help.
Thanks a lot,
Philipp
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