I am working on it; I already integrate some tools of GATK3 in a
dedicated instance of galaxy;
->
RealignerTargetCreator
->
IndelRealigner
->
HaplotypeCaller
T
hese are the tools that
I use most; I have written the
wrappers in java ...
I need at least one or two more week to achieve a package that
could be published in a tool shed (for testing)
Florian
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Hi all,
Is anyone working on (or has already created) wrappers for
GATK 3.0? Specifically, I'm looking for a wrapper for
genotypeGVCFs, but it seems like I would want all the GATK
wrappers to be updated. Any help is highly appreciated!
- Nik.