So it seems it has been deprecated a bit prematurely. Maybe the Galaxy team should “undeprecate” it untill a viable alternative is found.
Anyway, thanks again!
Matthias
> Op 27 jan. 2016, om 10:33 heeft Hans-Rudolf Hotz <hrh@fmi.ch> het volgende geschreven:
>
>
>
> On 01/27/2016 10:29 AM, Matthias De Smet wrote:
>> Hi Hans-Rudolf
>>
>> Thanks again, you’re a lifesaver!
>> Any suggestions on how I could eliminate the <code> tag, as the wiki states it’s deprecated?
>
> well, it has been 'deprecated' for many years now.....
>
>
>> I checked out <actions> but don’t see a straightforward wau to get the same results.
>
> same for me :(
>
>
> Hans-Rudolf
>
>
>
>
>>
>> Matthias
>>
>>> Op 27 jan. 2016, om 10:20 heeft Hans-Rudolf Hotz <hrh@fmi.ch> het volgende geschreven:
>>>
>>> Hi Matthias
>>>
>>> I don't think you can do that...I would delegate the filtering to the 'list_files' function, i.e. by calling:
>>>
>>> list_files(archive_source,query)
>>>
>>>
>>> Regards, Hans-Rudolf
>>>
>>>
>>> On 01/27/2016 10:07 AM, Matthias De Smet wrote:
>>>>
>>>> Hi All,
>>>>
>>>> I’m trying to implement a tool that get a list of options through the “dynamic_options” tag. I try to filter the options that get returned with another param, but it doensn’t seem to work.
>>>>
>>>> my tool xml looks like this
>>>>
>>>> <tool id="archivetolibrary" name="Copy files" version="0.1.0">
>>>> <description>from the archive to a data library</description>
>>>> <code file="list_files.py"/>
>>>> <command interpreter="bash">
>>>> test.sh > $log
>>>> </command>
>>>> <inputs>
>>>> <param name="archive_source" type="select" display="radio" label="Choose source archive">
>>>> <options from_file="archives.loc">
>>>> <column name="name" index="0"/>
>>>> <column name="value" index="1"/>
>>>> </options>
>>>> </param>
>>>> <param name="query" type="text" label="Search for files"/>
>>>> <param name="selected_file" type="select" label="Choose your file" dynamic_options="list_files(archive_source)">
>>>> <filter type="param_value" ref="query" column="0" />
>>>> </param>
>>>> </inputs>
>>>> <outputs>
>>>> <data name="log" format="txt" label="${tool.name} on ${on_string}"></data>
>>>> </outputs>
>>>> <tests>
>>>> <test>
>>>> </test>
>>>> </tests>
>>>> <help>
>>>> </help>
>>>> </tool>
>>>>
>>>>
>>>> Anyone with experience implementing filters? (Gx 15.10 on Ubuntu 14.04.3)
>>>>
>>>> Thanks!
>>>> Matthias
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