Hi Chris,

Take a look at this file :
lib/galaxy/jobs/runners/drmaa.py
in your galaxy directory.

You can export a path for binaries here. For example :
export PATH=$PATH:/opt/bin/
before export PYTHONPATH


Moreover, do not forget other path values in your service script or in your galaxy user profile.

Hope this help.



2011/8/23 Roman Valls <brainstorm@nopcode.org>
Did you adjust the SGE_ROOT environment variable to point to the
libdrmaa for SGE (probably /opt/sge_62u5_gr/bin/lx24-amd64) ?

This is of course just a guess, could you please provide some error
messages/logs ?

Cheers,
Roman

On 2011-08-23 10:20, Chris Cole wrote:
> BUMP
>
> Does anyone have any idea on this? Our Galaxy is currently out of action
> until this is sorted.
> Thanks,
>
> Chris
>
> On 22/08/11 10:08, Chris Cole wrote:
>> Hi,
>>
>> Following a recent update to our SGE, DRMAA is failing to load in
>> galaxy. The reason being that the path has changed. How do I change the
>> path for galaxy to find the libdrmaa module?
>> Cheers,
>>
>> Chris
>>
>>
>
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