Hi Nicola, This doesn't appear to be a known functional test failure (if I am reading the logs right), but I am also not the best resource to troubleshoot this particular type of problem. I am going to move this to the dev list for more feedback. If you want to add more details about your system (local? tracking galaxy-dist or central?) that might help. Best, Jen Galaxy team On 12/18/13 2:42 AM, Nicolas Lapalu wrote:
Hi,
I tried to run CCAT functionnal test, but I get an exception (same problem via web form) Data are well associated with the hg18 build, which is available in test-data/chrom/hg18.len
Error running CCAT. Traceback (most recent call last): File "/home/galaxy-dev/tools/peak_calling/ccat_wrapper.py", line 41, in <module> if __name__ == "__main__": main() File "/home/galaxy-dev/tools/peak_calling/ccat_wrapper.py", line 38, in main return stop_err( tmp_dir, e ) File "/home/galaxy-dev/tools/peak_calling/ccat_wrapper.py", line 13, in stop_err raise exception AssertionError: The required chromosome length file does not exist.
Any Idea ?
Thanks, Nicolas
-- Jennifer Hillman-Jackson http://galaxyproject.org