Hi, Galaxy Developers,
I have a hopefully quick question regarding configuring Galaxy cluster integration; I've configured our universe_wsgi.ini to include the options specified in this document:
http://wiki.g2.bx.psu.edu/Admin/Config/Performance/Cluster#Submitting_Jobs_a...
set_metadata_externally = True set_metadata_externally = True drmaa_external_runjob_script = scripts/drmaa_external_runner.py drmaa_external_killjob_script = scripts/drmaa_external_killer.py
I have also given the galaxy account full sudo privileges.
My question is that even after re-starting Galaxy and launching a job, when I schedule a job through galaxy, the job is still being scheduled as the galaxy user (if I run qstat, for example). Could anybody possibly provide some insight as to why this would be occurring? Do I need to set any other configuration options other than what I have specified above?
Thank-you so much,
Dan Sullivan