Hi Peter, This change would be simple to make, but it would result in the inclusion of all repositories with missing test components to be included in the list of failing tests. There are currently 2 filters that provide the information to categorize these repositories: missing test components ( True / False ) and tools functionally correct ( True / False ). I'm not sure it makes sense to add a 3rd filter, but if we can come up with a sensible one, I would be happy to add it. If not, do you want the list of failing tool tests to include repositories that are missing test components? Thanks! Greg On May 7, 2013, at 4:50 AM, Peter Cock wrote:
On Mon, May 6, 2013 at 1:55 PM, Dave Bouvier <dave@bx.psu.edu> wrote:
Peter,
Yes, there are a few issues that are causing some repositories not to be tested correctly. I've discovered the problem, but the solution will require a bit of work. My goal is to have this resolved as soon as possible.
--Dave B.
Hi Dave,
Things are looking sensible again on the Test Tool Shed - thanks :)
I have a query which might deserve discussion: Currently my some of my BLAST+ tools have missing tests and some are failing (due in part to limitations of the test framework) yet the repository is only listed under missing tool tests:
Latest revision: missing tool tests - includes ncbi_blast_plus Latest revision: failing tool tests - omits ncbi_blast_plus http://testtoolshed.g2.bx.psu.edu/view/peterjc/ncbi_blast_plus
As the yellow description makes clear, this is deliberate, but I would prefer to have ncbi_blast_plus listed in both places. In this case I know there are missing tests, but would hope there are no failing tests - yet the Tool Shed interface is effectively 'hiding' these failures from the prominent listing.
(Right now the failures are unexpected, it seems my changes to the automated installation were not successful - but that's why I'm testing them here to check this)
What does everyone else think?
Thanks,
Peter ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
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