Hi Janaki, can you try to remove this prior_installation_required completely? Also why do you need a repository dependency, I think that is not needed or? Cheers, Bjoern Am 03.04.2014 09:30, schrieb Janaki Rama Rao Gollapudi:
Hi Bjoern,
I also exported both the repositories from local toolshed. Please find the attached files.
Thanks, JanakiRam
On Thu, Apr 3, 2014 at 12:50 PM, Janaki Rama Rao Gollapudi < janakiram.gollapudi@india.semanticbits.com> wrote:
Hi,
Thanks for quick reply. Please find the attached .tar file of both the repositories.
Thanks, JanakiRam
On Thu, Apr 3, 2014 at 12:45 PM, Björn Grüning <bjoern.gruening@gmail.com>wrote:
This all seems to be fine, can you send me a tarball with both repositories ...
Thanks, Bjoern
Am 03.04.2014 09:05, schrieb Janaki Rama Rao Gollapudi:
Hi,
Did anyone faced this issue ?. I struck here. Please suggest me.
Thanks, JanakiRam
On Wed, Apr 2, 2014 at 3:10 PM, Janaki Rama Rao Gollapudi < janakiram.gollapudi@india.semanticbits.com> wrote:
Hi,
I have implemented a custom tool called 'barcode-parse' and uploaded this custom to into my local tool shed(which is running at http://localhost:9009). Also able to install this custom tool from galaxy.
Then I have added simple repository dependency. I have created a xml file 'repository_dependencies.xml'. Then I created a new repository in the toolShed called 'Test' and uploaded all necessary files(.py, definition xml file and repository dependency xml file) into this repository. (I have created another repository called 'string_occurrence' and uploaded necessary files into toolShed which is used as dependency repository)
<?xml version="1.0"?> <repositories description=""> <repository toolshed="http://localhost:9009" name="string_occurrence" owner="janakiram-t1" /> </repositories>
I tried to install custom tool 'barcode-parse' from galaxy, but I got below error message.
The repository dependency definitions for this repository are invalid and will be ignored.
I followed the steps mentioned in the galaxy wiki<https://wiki. galaxyproject.org/SimpleRepositoryDependencies>
Am I doing anything wrong? Please suggest me on this.
Thanks, JanakiRam
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/