Hello,<br><br>I am trying to run TopHat for paired end and this is my first time using Galaxy and TopHat and I have a doubt regarding what to mention in <label for="mate_inner_distance">Mean Inner Distance between Mate Pairs:</label>The default value is 20.<br>
<br>Should I leave the value or should I be changing the value.<br><br>What is <label for="mate_inner_distance">Mean Inner Distance between Mate Pairs:?<br><br>Thanks<br></label>