23 Mar
2015
23 Mar
'15
noon
On Mon, Mar 23, 2015 at 1:41 PM, John Chilton <jmchilton@gmail.com> wrote:
Hey Peter,
Thanks for continuing to apply pressure on these issues. I have pushed some logging into Galaxy's development branch (https://github.com/galaxyproject/galaxy/commit/8cb06d7fc2913b4d83ca01b50d76e...) that should make that error more informative. I don't know when that will get pushed out to bitbucket and the shed retested - but once those two things happen we will hopefully have a better idea what the problem is (probably some subtle deployment problem - some incompatible version of samtools on the path? samtools on Galaxy's path but not the test script's path?).
-John
Lovely - I agree this seems the most likely cause, so fingers crossed. Thank you, Peter