What I want to do in a hurry is to fix the problem of "Select" in "Filter and Sort" .It is a step very important for me to Sort SAM file for Cufflinks.Thank you very much for all of your help.
Per my last email:..... $ hg clone https://bitbucket.org/galaxy/galaxy-dist/ $ cd galaxy-dist $ hg update stable If you are running into issues, can you be more specific...provide error message? Steps on how to reproduce your issue? -- Adam Brenner Computer Science, Undergraduate Student Donald Bren School of Information and Computer Sciences Research Computing Support Office of Information Technology http://www.oit.uci.edu/rcs/ University of California, Irvine www.ics.uci.edu/~aebrenne/ aebrenne@uci.edu On Wed, Sep 11, 2013 at 6:58 PM, cngbgalaxy@gmail.com <cngbgalaxy@gmail.com> wrote:
Hi all, What I want to do in a hurry is to fix the problem of "Select" in "Filter and Sort" .It is a step very important for me to Sort SAM file for Cufflinks.Thank you very much for all of your help.
________________________________ cngbgalaxy
From: Adam Brenner Date: 2013-09-12 00:41 To: cngbgalaxy CC: joachim.jacob; galaxy-dev@lists.bx.psu.edu; galaxy-dev@bx.psu.edu Subject: Re: [galaxy-dev] Stable Galaxy for local install Galaxy development occurs in two repositories, galaxy-central and galaxy-dist. Changes are stabilized in galaxy-central and then pushed to galaxy-dist roughly once a month.[1]
So....
$ hg clone https://bitbucket.org/galaxy/galaxy-dist/ $ cd galaxy-dist $ hg update stable
[1]: http://wiki.galaxyproject.org/Admin/Get%20Galaxy
-- Adam Brenner Computer Science, Undergraduate Student Donald Bren School of Information and Computer Sciences
Research Computing Support Office of Information Technology http://www.oit.uci.edu/rcs/
University of California, Irvine www.ics.uci.edu/~aebrenne/ aebrenne@uci.edu
On Wed, Sep 11, 2013 at 8:42 AM, cngbgalaxy <cngbgalaxy@gmail.com> wrote:
Hi Joachim, Thank you very much for your help. Actually I find some problems about such versions of Galaxy in https://bitbucket.org/galaxy/galaxy-dist/downloads . We can not view the data in history by clicking the eyes icon on the c42567f43aa7 version.The "Select" in "Filter and Sort" fail to work on the 1ae95b3aa98d (release_2013.08.12 ) version and the 524f246ca853 (release_2013.06.03 ),though I don't know whether it is a bug or not. As a result,I feel confused about which version of Galaxy to install and avoid the above problems.
________________________________ cngbgalaxy
From: Joachim Jacob | VIB | Date: 2013-09-11 22:38 To: test galaxy CC: galaxy-dev; galaxy-dev Subject: Re: [galaxy-dev] Stable Galaxy for local install The latest code from the 'stable' branch of Galaxy is preferred. See the news brief accompanying the update (release_2013.08.12) on http://wiki.galaxyproject.org/DevNewsBriefs/2013_08_12
You need mercurial (http://mercurial.selenic.com/) for installing Galaxy. Report bugs at https://trello.com/b/75c1kASa/galaxy-development
Cheers Joachim
Joachim Jacob Contact details: http://www.bits.vib.be/index.php/about/80-team
On 09/11/2013 03:55 AM, test galaxy wrote:
Hi everyone, I want to install my local Galaxy with less bugs,and I don't know which version is more stable and work well.Could anyone give same advise?Thank you very much.
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