Hi people,

 

I'm presently trying to use the gmaj tool in galaxy and I have encounter and error when I try to make available the annotation data corresponding to each genome in the alignment.

 

I think my problem results from not knowing how to format the internal structure of the exons file, I'm pointing gmaj directly to each gff3 file I have constructed for these genomes.

 

The error that occurs is:

 

“Warning:

 

No genes found in exons file.”

 

My question is how to format properly the exons file (I think it would be helpful to have available a sample of the internal structure of the exons, underlays, etc files).

 

In the text bellow goes a sample of my gff3 file.

 

Any help will be very welcome,

 

Paulo

 

Ps. A sample of an exons file that someone used with gmaj would be helpful to check the internal structure of the exons file.