I'll update planemo to explicitly check for virtualenv before running Galaxy and give a very clear error message in this scenario. I guess I could even make it an explicit dependency of planemo in setup.py/PyPI - I wonder if it would be okay for planemo to mask the OS virtualenv when installing via pip, hmm... -John On Fri, Nov 20, 2015 at 12:58 AM, Tiago Antao <tra@popgen.net> wrote:
On Thu, 19 Nov 2015 20:35:42 +0000 John Chilton <jmchilton@gmail.com> wrote:
The latest development release of Galaxy which planemo targets by default requires virtualenv to be available. Can you verify that it is not available on your machine and install it and try again. I will try to have planemo give a clearer error in this case if it is indeed the problem.
I created a new environment from scratch and installed virtualenv. That did it. Thanks