Hello,<br><br>I have some questions about installing data onto my Ubuntu linux box. Mainly genomic data that can be used by the extract_genomic_dna.py script. I have done some attempts to get this working but now I&#39;m quite stuck. First I downloaded this data from the UCSC ftp site. (<a href="ftp://hgdownload.cse.ucsc.edu/goldenPath/hg18/chromosomes">ftp://hgdownload.cse.ucsc.edu/goldenPath/hg18/chromosomes</a> to be precise). Then I added the following line to &quot;faseq.loc&quot; as instructed: &quot;hg18    /home/muiser/data/Human_data/HG18/chromosomes&quot;.<br>
After this I restarted the galaxy deamon but nothing seems to have happened. I have the idea that I am missing certain steps. <br><br>The ultimate goal is to get a local galaxy install working like the one on &quot;<a href="http://main.g2.bx.psu.edu/">http://main.g2.bx.psu.edu/</a>&quot;<br>
<br>The wiki is helpful to install new tools and to get an idea of how stuff works but sparsely mentions data integration. Except for MAFs which I tried as well. I&#39;m now building an index for these .maf files which I assume will take quite some time.<br>
<br>I hope you can help me out a bit.<br><br>Thanks in advance,<br><br>Iwe Muiser<br>