Is it this tool : https://testtoolshed.g2.bx.psu.edu/view/xianrong/removing_consecutive_bins_with_same_score/c19a0a942e1b
Gildas-----------------------------------------------------------------
Gildas Le Corguillé - Bioinformatician/Bioanalyste
Plateforme ABiMS (Analyses and Bioinformatics for Marine Science)
Station Biologique de Roscoff - UPMC/CNRS - FR2424
Place Georges Teissier 29680 Roscoff FRANCE
tel: +33 2 98 29 23 81
http://abims.sb-roscoff.fr
------------------------------------------------------------------Le 23 févr. 2016 à 18:35, Björn Grüning <bjoern.gruening@gmail.com> a écrit :Hi,
is the script rm_consecutive_sameScore.pl part of your TS repo and next
to your tool XML file or where is it stored?
Thanks,
Bjoern
Am 23.02.2016 um 17:46 schrieb Xianrong Wong:Hi, I'm new to publishing tools/repository on the toolshed. I have used___________________________________________________________
planemo and lint and tests as well as serve all worked. I was able to
use the tool. However, when I uploaded it onto the test tool shed and
imported the tool on a cloud instance, I keep getting this error when
running job:
Fatal error: Exit code 2 () Can't open perl script
"rm_consecutive_sameScore.pl": No such file or directory
Please advise! I've been downloading and looking at what others did but
I still can't figure this out.
I've attached my .xml file and here are some of the commands I used to
upload the tool.
planemo shed_create --shed_target testtoolshed
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