Is it this tool : https://testtoolshed.g2.bx.psu.edu/view/xianrong/removing_consecutive_bins_with_same_score/c19a0a942e1b

Gildas

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Gildas Le Corguillé - Bioinformatician/Bioanalyste
Plateforme ABiMS (Analyses and Bioinformatics for Marine Science)

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Le 23 févr. 2016 à 18:35, Björn Grüning <bjoern.gruening@gmail.com> a écrit :

Hi,

is the script rm_consecutive_sameScore.pl part of your TS repo and next
to your tool XML file or where is it stored?

Thanks,
Bjoern

Am 23.02.2016 um 17:46 schrieb Xianrong Wong:

Hi, I'm new to publishing tools/repository on the toolshed.  I have used
planemo and lint and tests as well as serve all worked.  I was able to
use the tool.  However, when I uploaded it onto the test tool shed and
imported the tool on a cloud instance, I keep getting this error when
running job:

Fatal error: Exit code 2 () Can't open perl script
"rm_consecutive_sameScore.pl": No such file or directory



Please advise! I've been downloading and looking at what others did but
I still can't figure this out.



I've attached my .xml file and here are some of the commands I used to
upload the tool.

planemo shed_create --shed_target testtoolshed



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