Hello Chris, You should be able to run functional tests from the Galaxy install directory using the following from the command line. %sh run_functional_tests.sh There are several options you can use as well. Greg On Jan 18, 2012, at 4:38 PM, Fields, Christopher J wrote:
I have been following the basic protocol for running remote tests on a Galaxy server (in this case, our local one) using:
http://wiki.g2.bx.psu.edu/Admin/Running%20Tests
From reading this, I assume the tests are to be run from the galaxy root directory, like so:
GALAXY_TEST_EXTERNAL=1 GALAXY_TEST_HOST=my.local.galaxy.url GALAXY_TEST_PORT=8080 \ ./nosetests.sh
However, no 'nosetests.sh' script exists there. Should we be using ./scripts/nosetests.py? ./scripts/functional_tests.py?
Any clarification on this would be very helpful, we're just searching for a way to run tests in as automated a way as possible using the server configuration.
chris
Chris Fields Senior Research Scientist National Center for Supercomputing Applications Institute for Genomic Biology University of Illinois at Urbana-Champaign
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