Hi all,
I'm on 17.05 galaxy version and display it on firefox.
I'm trying to use "show structure" functionnality on my histories
(I've never tried before this version) and I obtain this error :
URL: http://192.168.100.98:8080/galaxy/history/display_ structured
File '/data/galaxy-dist/.venv/local/lib/python2.7/site- packages/weberror/ evalexception.py',
line 431 in respond
app_iter = self.application(environ, detect_start_response)
File '/data/galaxy-dist/.venv/local/lib/python2.7/site- packages/paste/recursive.py',
line 85 in __call__
return self.application(environ, start_response)
File '/data/galaxy-dist/.venv/local/lib/python2.7/site- packages/paste/httpexceptions. py',
line 640 in __call__
return self.application(environ, start_response)
File '/data/galaxy-dist/lib/galaxy/web/framework/base.py', line 135 in __call__
return self.handle_request( environ, start_response )
File '/data/galaxy-dist/lib/galaxy/web/framework/base.py', line 214 in
handle_request
body = method( trans, **kwargs )
File '/data/galaxy-dist/lib/galaxy/webapps/galaxy/controllers/ history.py',
line 571 in display_structured
return trans.fill_template( "history/display_structured.mako",
items=items, history=history )
File '/data/galaxy-dist/lib/galaxy/web/framework/webapp.py', line 891
in fill_template
return self.fill_template_mako( filename, **kwargs )
File '/data/galaxy-dist/lib/galaxy/web/framework/webapp.py', line 905
in fill_template_mako
return template.render( **data )
File '/data/galaxy-dist/.venv/local/lib/python2.7/site- packages/mako/template.py',
line 445 in render
return runtime._render(self, self.callable_, args, data)
File '/data/galaxy-dist/.venv/local/lib/python2.7/site- packages/mako/runtime.py',
line 829 in _render
**_kwargs_for_callable(callable_, data))
File '/data/galaxy-dist/.venv/local/lib/python2.7/site- packages/mako/runtime.py',
line 864 in _render_context
_exec_template(inherit, lclcontext, args=args, kwargs=kwargs)
File '/data/galaxy-dist/.venv/local/lib/python2.7/site- packages/mako/runtime.py',
line 890 in _exec_template
callable_(context, *args, **kwargs)
File '/data/galaxy-dist/database/compiled_templates/base.mako. py ',
line 63 in render_body
__M_writer(unicode(next.body()))
File '/data/galaxy-dist/database/compiled_templates/history/dis play_structured.mako.py ',
line 50 in render_body
__M_writer(unicode(render_item( entity, children )))
File '/data/galaxy-dist/database/compiled_templates/history/dis play_structured.mako.py ',
line 35 in render_item
return render_render_item(context._locals(__M_locals),entity, children)
File '/data/galaxy-dist/database/compiled_templates/history/dis play_structured.mako.py ',
line 191 in render_render_item
render_item_job( entity, children )
File '/data/galaxy-dist/database/compiled_templates/history/dis play_structured.mako.py ',
line 183 in render_item_job
return render_render_item_job(context,job,children)
File '/data/galaxy-dist/database/compiled_templates/history/dis play_structured.mako.py ',
line 239 in render_render_item_job
__M_writer(unicode( show_params.inputs_recursive( tool.inputs,
params_object, depth=1 ) ))
File '/data/galaxy-dist/database/compiled_templates/show_ params.mako.py ',
line 293 in render_inputs_recursive
for i, element in enumerate(listify(param_values[input.name])):
TypeError: 'Undefined' object is not callable
Is it a problem with this history (I've tested with a full green
history and with history containing red jobs without difference in
error message) or with my galaxy configuration may be ?
Thanks.
Julie
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