(1) There are quite a few tools that use the input's dbkey in some way, such as to retrieve sequence/index data. You'll see this quite a bit in tool command lines:


--dbkey=${input.metadata.dbkey} 


With this approach, you won't need to provide a reference list parameter at all. Tools such as SAM to BAM and Cufflinks work this way.

(2) There's currently no way in the UI to set a reference list based on the selected dataset. This could be done using a combination of the API + Backbone JS objects + jQuery without too much trouble.

Best,
J.

On Jul 11, 2012, at 12:31 PM, Langhorst, Brad wrote:

I would like the reference list to be automatically selected based on the dbkey of the selected input...

I think I've seen this, but I can'f seem to find an example.

Anybody know?
Should be some easy jquery i guess.


Brad
--
Brad Langhorst
978-380-7564




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