Nope, the name of the gff file is unique except for the fact that I uploaded different versions of it in the data library. The second test I did has only one version and has the same problem. Remember that the file imported from the data library into the history works but the file directly from the data library fails.

I've been looking in the database to see where the dataset 4402 might come from, but till now I really don't see how trackster associates this information with dataset 44835.

Cheers,

Cristian

---

Subject: Re: [galaxy-dev] Trackster bug
From: hansrudolf.hotz@fmi.ch
Date: Wed, 10 Jun 2015 11:54:07 +0200
CC: galaxy-dev@lists.galaxyproject.org
To: tuto345@hotmail.com

just double checking:    and what about the 'name' in the History panel?

Hans-Rudolf

On Jun 10, 2015, at 11:43 AM, C. Ch. <tuto345@hotmail.com> wrote:

Hi Hans,

Actually the older dataset has nothing to do with the actual GFF file name-wise or other. Trackster tries to load database/files/004/dataset_4402.dat (a dataset created in 01/2013 and which has been deleted and purged) whereas the GFF file corresponds to database/files/044/dataset_44835.dat.

In another test, trackster tries to load database/files/003/dataset_3905.dat (12/2012, deleted and purged) when the real dataset file for the GFF is database/files/030/dataset_30088.dat.

Cheers,

Cristian

---

Subject: Re: [galaxy-dev] Trackster bug
From: hansrudolf.hotz@fmi.ch
Date: Wed, 10 Jun 2015 10:38:58 +0200
CC: galaxy-dev@lists.galaxyproject.org
To: tuto345@hotmail.com

Hi Cristian

This problem sounds familiar. Have the new and the old file the same name? If so, try renaming your new gff file.

Hans-Rudolf

On Jun 10, 2015, at 10:34 AM, C. Ch. <tuto345@hotmail.com> wrote:

Hi all,

I have uploaded a gff annotation to a shared library and when I try to load it into trackster it tries consistently to load an older dataset that does not exist anymore and does not correspond to the real gff dataset file. If I load the gff into a history, then this file is correctly loaded into trackster.

Any ideas what is going on? Any workaround so that we can load visualisations without creating histories with all the data beforehand?

Cheers,

Cristian

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
 https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
 http://galaxyproject.org/search/mailinglists/