Hi Hans-Rudolf;
Yes!! I didn't pay attention and i was really calling the script fom ~/galaxy_dist/scripts/cleanup_datasets/.
Now when I call it from ~/galaxy_dist/ it works very well.
Thanks :)
Amine
looks like you are calling the script from:
On 06/19/2012 07:11 PM, Chebbi Mohamed Amine wrote:
Hi Galaxy team !
I'am trying to remove userless histories from my galaxy database as
mentoned in this link (
by using the command above :
python cleanup_datasets.py universe_wsgi.ini -d 60 -1
However I get an error message like this :
File "cleanup_datasets.py", line 13, in <module>
from galaxy import eggs
ImportError: No module named galaxy
~/galaxy_dist/scripts/cleanup_datasets/
try calling it with:
python scripts/cleanup_datasets/cleanup_datasets.py universe_wsgi.ini -d 60 -1
from: ~/galaxy_dist/
Regards, Hans
___________________________________________________________
Although I set cleanup_job = never in my Galaxy config and check the PBS
script like mentioned in the mailing list discussions as above , i have
always the same problem of galaxy module :
GALAXY_LIB="/path/to/galaxy-dist/lib"
if [ "$GALAXY_LIB" != "None" ]; then
if [ -n "$PYTHONPATH" ]; then
export PYTHONPATH="$GALAXY_LIB:$PYTHONPATH"
else
export PYTHONPATH="$GALAXY_LIB"
fi
fi
Could someone help me please !
Thanks
Amine
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