[galaxy-dev] Tophat2 Output file error

To whom it may concern, I am a grad student at the University of Iowa using Galaxy to analyze data from an RNA-seq experiment. I have been using Tophat2 and noticed that it is not longer providing an alignment summary text file in the output, which it used to do. I was wondering if this was an error, or if there was a way to obtain that output file (as the information is incredibly useful). Thanks, Laura